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A Multicore Path to Connectomics-on-Demand

Alexander Matveev, Yaron Meirovitch, Hayk Saribekyan, Wiktor Jakubiuk, Tim Kaler, Gergely Ódor, David M. Budden, Aleksandar Zlateski, Nir Shavit

Abstract

The current design trend in large scale machine learning is to use distributed clusters of CPUs and GPUs with MapReduce-style programming. Some have been led to believe that this type of horizontal scaling can reduce or even eliminate the need for traditional algorithm development, careful parallelization, and performance engineering. This paper is a case study showing the contrary: that the benefits of algorithms, parallelization, and performance engineering, can sometimes be so vast that it is possible to solve "cluster-scale" problems on a single commodity multicore machine.

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